Kidney
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Glo-In-One-v2: holistic identification of glomerular cells, tissues, and lesions in human and mouse histopathology
Yu, Lining; Yin, Mengmeng; Deng, Ruining; Liu, Quan; Yao, Tianyuan; Cui, Can; Guo, Junlin; Wang, Yu; Wang, Yaohong; Zhao, Shilin; Yang, Haichun; & Huo, Yuankai. (2025). Glo-In-One-v2: Holistic identification of glomerular cells, tissues, and lesions in human and mouse histopathology. Journal of Medical Imaging, 12(6), 61406. https://doi.org/10.1117/1.JMI.12.6.061406 Segmenting… Read MoreJanuary 28, 2026
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Evaluating cell AI foundation models in kidney pathology with human-in-the-loop enrichment
Guo, J., Lu, S., Cui, C., Deng, R., Yao, T., Tao, Z., Lin, Y., Lionts, M., Liu, Q., Xiong, J., Wang, Y., Zhao, S., Chang, C. E., Wilkes, M., Fogo, A. B., Yin, M., Yang, H., & Huo, Y. (2025). Evaluating cell AI foundation models in kidney pathology… Read MoreDecember 19, 2025
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SynStitch: A Self-Supervised Learning Network for Ultrasound Image Stitching Using Synthetic Training Pairs and Indirect Supervision
Yao, Xing; Yu, Runxuan; Hu, Dewei; Yang, Hao; Lou, Ange; Wang, Jiacheng; Lu, Daiwei; Arenas, Gabriel; Oguz, Baris; Pouch, Alison; Schwartz, Nadav; Byram, Brett C.; Oguz, Ipek. “SynStitch: A self-supervised learning network for ultrasound image stitching using synthetic training pairs and indirect supervision.” Proceedings – International… Read MoreJune 20, 2025
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GloFinder: AI-empowered QuPath plugin for WSI-level glomerular detection, visualization, and curation
Yue, Jialin; Yao, Tianyuan; Deng, Ruining; Lu, Siqi; Guo, Junlin; Liu, Quan; Xiong, Juming; Yin, Mengmeng; Yang, Haichun; Huo, Yuankai. “GloFinder: AI-empowered QuPath plugin for WSI-level glomerular detection, visualization, and curation.” Journal of Pathology Informatics 17 (2025): 100433. https://doi.org/10.1016/j.jpi.2025.100433. … Read MoreApril 23, 2025
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Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology
Jiayuan Chen, Yu Wang, Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Yilin Liu, Jianyong Zhong, Agnes B. Fogo, Haichun Yang, Shilin Zhao, and Yuankai Huo. “Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology.” Proceedings of SPIE Medical Imaging… Read MoreJune 20, 2024
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Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers
Muhao Liu, Chenyang Qi, Shunxing Bao, Quan Liu, Ruining Deng, Yu Wang, Shilin Zhao, Haichun Yang, and Yuankai Huo. “Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers.” Proceedings of SPIE Medical Imaging 2024: Digital and Computational Pathology, vol. 12933, 129330I, 2024. Segmenting different… Read MoreJune 20, 2024