Datasets

Katherine Musacchio Schafer; Jacob Franklin; Peter J. Embí; Colin G. Walsh (2026). Loneliness, anxiety symptoms, depressive symptoms, and suicidal ideation in the All of Us dataset. JAMA Network Open, 9(3), e260596. https://doi.org/10.1001/jamanetworkopen.2026.0596 This study examined how feelings of loneliness may help explain the link between anxiety, depression,… Read More

Liu, Qi; Wang, Yu; Hsu, Chihyuan; Wanjalla, Celestine N.; Lau, Ken S.; & Shyr, Yu. (2026). Microenvironment-aware spatial modeling for accurate inference of cell identity. Nucleic Acids Research, 54(1). https://doi.org/10.1093/nar/gkaf1477 Spatial omics technologies make it possible to measure many molecular features in cells while also preserving information about… Read More

Clayton, E. W., Rose, S., Nebecker, C., Novak, L., Bensoussan, Y. E., Chen, Y., Collins, B. X., Cordes, A., Evans, B. J., Ferryman, K. S., Hurst, S., Jiang, X., Lee, A. Y., McWeeney, S., Parker, J., Bélisle-Pipon, J.-C., Rosenthal, E. S., Yin, Z., Yracheta, J. M., & Malin,… Read More

Li, Xueyuan., Cui, Can., Deng, Ruining., Tang, Yucheng., Liu, Quan., Yao, Tianyuan., Bao, Shunxing., Chowdhury, Naweed Iffat., Yang, Haichun., & Huo, Yuankai. (2025). Fine-grained multiclass nuclei segmentation with molecular empowered all-in-SAM model. Journal of Medical Imaging, 12(5), 57501. https://doi.org/10.1117/1.JMI.12.5.057501 Recent advances in computational pathology—the use of computers to… Read More

Pourmotabbed, Haatef, Martin, Caroline G., Goodale, Sarah E., Doss, Derek J., Wang, Shiyu, Bayrak, Roza G., Kang, Hakmook, Morgan, Victoria L., Englot, Dario J., & Chang, Catie E. (2025). “Multimodal state-dependent connectivity analysis of arousal and autonomic centers in the brainstem and basal forebrain.” Imaging Neuroscience, 3,… Read More

Kim, Michael E., Gao, Chenyu, Newlin, Nancy R., Rudravaram, Gaurav, Krishnan, Aravind R., Ramadass, Karthik, Kanakaraj, Praitayini, Schilling, Kurt G., Dewey, Blake E., & Bennett, David Alan. (2025). “Scalable quality control on processing of large diffusion-weighted and structural magnetic resonance imaging datasets.” PLOS ONE, 20(8), e0327388. Read More

Cheng, Xueqi; Wang, Yu; Liu, Yunchao; Zhao, Yuying; Aggarwal, Charu C.; Derr, Tyler. “Edge Classification on Graphs: New Directions in Topological Imbalance.” WSDM 2025 – Proceedings of the 18th ACM International Conference on Web Search and Data Mining (2025): 392-400. https://doi.org/10.1145/3701551.3703518. Read More