{"id":583,"date":"2018-07-09T13:12:12","date_gmt":"2018-07-09T19:12:12","guid":{"rendered":"https:\/\/www.vanderbilt.edu\/cit\/?page_id=583"},"modified":"2024-01-25T14:28:55","modified_gmt":"2024-01-25T20:28:55","slug":"global-untargeted-targeted-metabolomics","status":"publish","type":"page","link":"https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/","title":{"rendered":"Metabolomics Study Design &#8211; Global Untargeted or Targeted Metabolomics?"},"content":{"rendered":"<div  style='padding-bottom:10px; ' class='av-special-heading av-special-heading-h3    avia-builder-el-0  el_before_av_textblock  avia-builder-el-first  '><h3 class='av-special-heading-tag '  itemprop=\"headline\"  >1 &#8211; Untargeted or Targeted Metabolomics &#8211; Which Approach is Right for You?<\/h3><div class='special-heading-border'><div class='special-heading-inner-border' ><\/div><\/div><\/div>\n<section class=\"av_textblock_section \"  itemscope=\"itemscope\" itemtype=\"https:\/\/schema.org\/CreativeWork\" ><div class='avia_textblock  '   itemprop=\"text\" ><p>Metabolomics analyses can be divided into two main categories: 1) <strong>global untargeted<\/strong> and 2) <strong>targeted metabolomics<\/strong>. Each approach has its own advantages, applications and limitations as outlined below.<\/p>\n<\/div><\/section>\n<div  style='height:20px' class='hr hr-invisible   avia-builder-el-2  el_after_av_textblock  el_before_av_one_half '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div>\n<div class=\"flex_column av_one_half  no_margin flex_column_div first  avia-builder-el-3  el_after_av_hr  el_before_av_one_half  \" style='padding:0px 20px 0px 0px ; border-radius:0px; '><p><div  class='av-hotspot-image-container   av-hotspot-numbered av-mobile-fallback-active  av-permanent-tooltip  avia-builder-el-4  el_before_av_hr  avia-builder-el-first  av-non-fullwidth-hotspot-image'  itemprop=\"image\" itemscope=\"itemscope\" itemtype=\"https:\/\/schema.org\/ImageObject\" ><div class='av-hotspot-container'><div class='av-hotspot-container-inner-cell'><div class='av-hotspot-container-inner-wrap'><div class='av-image-hotspot av-image-hotspot-1 av-permanent-tooltip' data-avia-tooltip-position='top' data-avia-tooltip-alignment='left' data-avia-tooltip-class='av-tt-default-width av-tt-pos-above av-tt-align-left  av-mobile-fallback-active  av-permanent-tooltip-single  main_color av-tt-hotspot' data-avia-tooltip='&lt;p&gt;&lt;a href=&quot;https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/&quot;&gt;Untargeted or Targeted&lt;\/a&gt;&lt;\/p&gt;\n' style='top: 46.9%; left: 52.4%; '><a href=https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-replicates\/  class='av-image-hotspot_inner' style=' '>1<\/a><div class='av-image-hotspot-pulse' ><\/div><\/div><div class='av-image-hotspot av-image-hotspot-2 av-permanent-tooltip' data-avia-tooltip-position='bottom' data-avia-tooltip-alignment='right' data-avia-tooltip-class='av-tt-default-width av-tt-pos-below av-tt-align-right  av-mobile-fallback-active  av-permanent-tooltip-single  main_color av-tt-hotspot' data-avia-tooltip='&lt;p&gt;&lt;strong&gt;&lt;a href=&quot;https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-replicates\/&quot;&gt;Replicates &amp; Volumes&lt;\/a&gt;&lt;\/strong&gt;&lt;\/p&gt;\n' style='top: 62.2%; left: 53.9%; '><a href=https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-storage-and-handling\/  class='av-image-hotspot_inner' style=' '>2<\/a><div class='av-image-hotspot-pulse' ><\/div><\/div><div class='av-image-hotspot av-image-hotspot-3 av-permanent-tooltip' data-avia-tooltip-position='top' data-avia-tooltip-alignment='left' data-avia-tooltip-class='av-tt-default-width av-tt-pos-above av-tt-align-left  av-mobile-fallback-active  av-permanent-tooltip-single  main_color av-tt-hotspot' data-avia-tooltip='&lt;p&gt;&lt;a href=&quot;https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-storage-and-handling\/&quot;&gt;&lt;strong&gt;Handling &amp; Storage&lt;\/strong&gt;&lt;\/a&gt;&lt;\/p&gt;\n' style='top: 60%; left: 72.3%; '><a href=https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/  class='av-image-hotspot_inner' style=' '>3<\/a><div class='av-image-hotspot-pulse' ><\/div><\/div><div class='av-image-hotspot av-image-hotspot-4 av-permanent-tooltip' data-avia-tooltip-position='bottom' data-avia-tooltip-alignment='left' data-avia-tooltip-class='av-tt-default-width av-tt-pos-below av-tt-align-left  av-mobile-fallback-active  av-permanent-tooltip-single  main_color av-tt-hotspot' data-avia-tooltip='&lt;p&gt;&lt;a href=&quot;https:\/\/www.vanderbilt.edu\/cit\/full-service-shared-resource-core\/&quot;&gt;&lt;strong&gt;Workflows&lt;\/strong&gt;&lt;\/a&gt;&lt;\/p&gt;\n' style='top: 52.3%; left: 10.2%; '><a href=https:\/\/www.vanderbilt.edu\/cit\/full-service-shared-resource-core\/  class='av-image-hotspot_inner' style=' '>4<\/a><div class='av-image-hotspot-pulse' ><\/div><\/div><div class='av-image-hotspot av-image-hotspot-5 av-permanent-tooltip' data-avia-tooltip-position='top' data-avia-tooltip-alignment='left' data-avia-tooltip-class='av-tt-default-width av-tt-pos-above av-tt-align-left  av-mobile-fallback-active  av-permanent-tooltip-single  main_color av-tt-hotspot' data-avia-tooltip='&lt;p&gt;&lt;a href=&quot;https:\/\/www.vanderbilt.edu\/cit\/metabolite-identification-confidence-levels\/&quot;&gt;&lt;strong&gt;ID Confidence Levels&lt;\/strong&gt;&lt;\/a&gt;&lt;\/p&gt;\n' style='top: 15.5%; left: 21.8%; '><a href=https:\/\/www.vanderbilt.edu\/cit\/metabolite-identification-confidence-levels\/  class='av-image-hotspot_inner' style=' '>5<\/a><div class='av-image-hotspot-pulse' ><\/div><\/div><img decoding=\"async\" class='wp-image-1583 avia-img-lazy-loading-not-1583 avia_image' src=\"https:\/\/cdn.vanderbilt.edu\/vu-URL\/wp-content\/uploads\/sites\/166\/2024\/01\/25140908\/IMG_6580c_cutout_small_lowerres-1030x654-1.jpg\" alt='' title='IMG_6580c_cutout_small_lowerres-1030x654'  height=\"654\" width=\"1030\"  itemprop=\"thumbnailUrl\" srcset=\"https:\/\/cdn.vanderbilt.edu\/vu-URL\/wp-content\/uploads\/sites\/166\/2024\/01\/25140908\/IMG_6580c_cutout_small_lowerres-1030x654-1.jpg 1030w, https:\/\/cdn.vanderbilt.edu\/vu-URL\/wp-content\/uploads\/sites\/166\/2024\/01\/25140908\/IMG_6580c_cutout_small_lowerres-1030x654-1-300x190.jpg 300w, https:\/\/cdn.vanderbilt.edu\/vu-URL\/wp-content\/uploads\/sites\/166\/2024\/01\/25140908\/IMG_6580c_cutout_small_lowerres-1030x654-1-768x488.jpg 768w, https:\/\/cdn.vanderbilt.edu\/vu-URL\/wp-content\/uploads\/sites\/166\/2024\/01\/25140908\/IMG_6580c_cutout_small_lowerres-1030x654-1-705x448.jpg 705w\" sizes=\"(max-width: 1030px) 100vw, 1030px\" \/><\/div><\/div><\/div><div class='av-hotspot-fallback-tooltip av-image-hotspot-1 av-permanent-tooltip'><div class='av-hotspot-fallback-tooltip-count'>1<div class='avia-arrow'><\/div><\/div><div class='av-hotspot-fallback-tooltip-inner clearfix'><p>\n<a href=\"https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/\">Untargeted or Targeted<\/a><\/p>\n<\/div><\/div><div class='av-hotspot-fallback-tooltip av-image-hotspot-2 av-permanent-tooltip'><div class='av-hotspot-fallback-tooltip-count'>2<div class='avia-arrow'><\/div><\/div><div class='av-hotspot-fallback-tooltip-inner clearfix'><p>\n<strong><a href=\"https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-replicates\/\">Replicates &amp; Volumes<\/a><\/strong><\/p>\n<\/div><\/div><div class='av-hotspot-fallback-tooltip av-image-hotspot-3 av-permanent-tooltip'><div class='av-hotspot-fallback-tooltip-count'>3<div class='avia-arrow'><\/div><\/div><div class='av-hotspot-fallback-tooltip-inner clearfix'><p>\n<a href=\"https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-storage-and-handling\/\"><strong>Handling &amp; Storage<\/strong><\/a><\/p>\n<\/div><\/div><div class='av-hotspot-fallback-tooltip av-image-hotspot-4 av-permanent-tooltip'><div class='av-hotspot-fallback-tooltip-count'>4<div class='avia-arrow'><\/div><\/div><div class='av-hotspot-fallback-tooltip-inner clearfix'><p>\n<a href=\"https:\/\/www.vanderbilt.edu\/cit\/full-service-shared-resource-core\/\"><strong>Workflows<\/strong><\/a><\/p>\n<\/div><\/div><div class='av-hotspot-fallback-tooltip av-image-hotspot-5 av-permanent-tooltip'><div class='av-hotspot-fallback-tooltip-count'>5<div class='avia-arrow'><\/div><\/div><div class='av-hotspot-fallback-tooltip-inner clearfix'><p>\n<a href=\"https:\/\/www.vanderbilt.edu\/cit\/metabolite-identification-confidence-levels\/\"><strong>ID Confidence Levels<\/strong><\/a><\/p>\n<\/div><\/div><\/div><br \/>\n<div  style='height:40px' class='hr hr-invisible   avia-builder-el-5  el_after_av_image_hotspot  el_before_av_textblock  avia-builder-el-first '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div><br \/>\n<section class=\"av_textblock_section \"  itemscope=\"itemscope\" itemtype=\"https:\/\/schema.org\/CreativeWork\" ><div class='avia_textblock  '   itemprop=\"text\" ><p><strong>Targeted metabolomics<\/strong> enables validation and absolute quantification of a chosen subset of metabolites (e.g., metabolites within a specific pathway). As such, this method can also be used to complement an untargeted approach.<\/p>\n<\/div><\/section><\/p><\/div><div class=\"flex_column av_one_half  no_margin flex_column_div av-zero-column-padding   avia-builder-el-7  el_after_av_one_half  el_before_av_hr  \" style='border-radius:0px; '><p><section class=\"av_textblock_section \"  itemscope=\"itemscope\" itemtype=\"https:\/\/schema.org\/CreativeWork\" ><div class='avia_textblock  '   itemprop=\"text\" ><p><strong>Global, untargeted metabolomics<\/strong> is hypothesis-generating. It is typically performed to collect and analyze <em>all<\/em> detectable metabolites in a sample. As a discovery approach, global, untargeted analysis can also reveal novel compounds and chemical unknowns potentially leading to new insights in disease mechanism or treatment. As a result, various <strong><a href=\"https:\/\/www.vanderbilt.edu\/cit\/metabolomics-study-design-levels-of-detail\/\">levels of detail<\/a><\/strong> and validation can be achieved.<\/p>\n<\/div><\/section><br \/>\n<div  style='height:10px' class='hr hr-invisible   avia-builder-el-9  el_after_av_textblock  el_before_av_image '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div><br \/>\n<div  class='avia-image-container  av-styling-    avia-builder-el-10  el_after_av_hr  avia-builder-el-last  avia-align-center '  itemprop=\"image\" itemscope=\"itemscope\" itemtype=\"https:\/\/schema.org\/ImageObject\"  ><div class='avia-image-container-inner'><div class='avia-image-overlay-wrap'><img decoding=\"async\" class='wp-image-836 avia-img-lazy-loading-not-836 avia_image' src=\"https:\/\/cdn.vanderbilt.edu\/vu-wp0\/wp-content\/uploads\/sites\/166\/2018\/06\/19134150\/Metabolomics_Varieties_500.jpg\" alt='Molecular Omics Applications' title='Metabolomics_Varieties_500' height=\"400\" width=\"484\"  itemprop=\"thumbnailUrl\" srcset=\"https:\/\/cdn.vanderbilt.edu\/vu-wp0\/wp-content\/uploads\/sites\/166\/2018\/06\/19134150\/Metabolomics_Varieties_500.jpg 484w, https:\/\/cdn.vanderbilt.edu\/vu-wp0\/wp-content\/uploads\/sites\/166\/2018\/06\/19134150\/Metabolomics_Varieties_500-300x248.jpg 300w, https:\/\/cdn.vanderbilt.edu\/vu-wp0\/wp-content\/uploads\/sites\/166\/2018\/06\/19134150\/Metabolomics_Varieties_500-450x372.jpg 450w\" sizes=\"(max-width: 484px) 100vw, 484px\" \/><\/div><\/div><\/div><\/p><\/div><\/p>\n<div  style='height:60px' class='hr hr-invisible   avia-builder-el-11  el_after_av_one_half  el_before_av_one_full '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div>\n<div class=\"flex_column av_one_full  flex_column_div av-zero-column-padding first  avia-builder-el-12  el_after_av_hr  el_before_av_one_fourth  \" style='border-radius:0px; '><section class=\"av_textblock_section \"  itemscope=\"itemscope\" itemtype=\"https:\/\/schema.org\/CreativeWork\" ><div class='avia_textblock  '   itemprop=\"text\" ><h5>Read our other tips to get started with metabolomics analyses:<\/h5>\n<\/div><\/section><\/div>\n<div class=\"flex_column av_one_fourth  flex_column_div av-zero-column-padding first  avia-builder-el-14  el_after_av_one_full  el_before_av_one_fourth  column-top-margin\" style='border-radius:0px; '><\/div>\n<div class=\"flex_column av_one_fourth  flex_column_div av-zero-column-padding   avia-builder-el-15  el_after_av_one_fourth  el_before_av_one_fourth  column-top-margin\" style='border-radius:0px; '><p><div  class='avia-button-wrap avia-button-center  avia-builder-el-16  el_before_av_hr  avia-builder-el-first ' ><a href='https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-replicates\/' class='avia-button avia-button-fullwidth   avia-icon_select-no avia-color-theme-color '  style='color:#ffffff; ' ><span class='avia_iconbox_title' >2. Sample Replicates and Volumes<\/span><span class='avia_button_background avia-button avia-button-fullwidth avia-color-blue' ><\/span><\/a><\/div><br \/>\n<div  style='height:20px' class='hr hr-invisible   avia-builder-el-17  el_after_av_button_big  el_before_av_button_big  avia-builder-el-no-sibling '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div><br \/>\n<div  class='avia-button-wrap avia-button-center  avia-builder-el-18  el_after_av_hr  avia-builder-el-last ' ><a href='https:\/\/www.vanderbilt.edu\/cit\/metabolomics-sample-storage-and-handling\/' class='avia-button avia-button-fullwidth   avia-icon_select-no avia-color-theme-color '  style='color:#ffffff; ' ><span class='avia_iconbox_title' >3. Sample Handling and Storage<\/span><span class='avia_button_background avia-button avia-button-fullwidth avia-color-blue' ><\/span><\/a><\/div><\/p><\/div>\n<div class=\"flex_column av_one_fourth  flex_column_div av-zero-column-padding   avia-builder-el-19  el_after_av_one_fourth  el_before_av_one_fourth  column-top-margin\" style='border-radius:0px; '><p><div  class='avia-button-wrap avia-button-center  avia-builder-el-20  el_before_av_hr  avia-builder-el-first ' ><a href='https:\/\/www.vanderbilt.edu\/cit\/full-service-shared-resource-core\/' class='avia-button avia-button-fullwidth   avia-icon_select-no avia-color-theme-color '  style='color:#ffffff; ' ><span class='avia_iconbox_title' >4. General Workflows at the CIT<\/span><span class='avia_button_background avia-button avia-button-fullwidth avia-color-blue' ><\/span><\/a><\/div><br \/>\n<div  style='height:20px' class='hr hr-invisible   avia-builder-el-21  el_after_av_button_big  el_before_av_button_big  avia-builder-el-no-sibling '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div><br \/>\n<div  class='avia-button-wrap avia-button-center  avia-builder-el-22  el_after_av_hr  avia-builder-el-last ' ><a href='https:\/\/www.vanderbilt.edu\/cit\/metabolite-identification-confidence-levels\/' class='avia-button avia-button-fullwidth   avia-icon_select-no avia-color-theme-color '  style='color:#ffffff; ' ><span class='avia_iconbox_title' >5. Identification Confidence Levels<\/span><span class='avia_button_background avia-button avia-button-fullwidth avia-color-blue' ><\/span><\/a><\/div><\/p><\/div>\n<div class=\"flex_column av_one_fourth  flex_column_div av-zero-column-padding   avia-builder-el-23  el_after_av_one_fourth  el_before_av_hr  column-top-margin\" style='border-radius:0px; '><\/div>\n<div  style='height:60px' class='hr hr-invisible   avia-builder-el-24  el_after_av_one_fourth  el_before_av_social_share '><span class='hr-inner ' ><span class='hr-inner-style'><\/span><\/span><\/div>\n<div  class='av-social-sharing-box  avia-builder-el-25  el_after_av_hr  avia-builder-el-last  '><div class='av-share-box'><h5 class='av-share-link-description av-no-toc '>Share this entry<\/h5><ul class='av-share-box-list noLightbox'><li class='av-share-link av-social-link-facebook' ><a target=\"_blank\" aria-label=\"Share on Facebook\" href='https:\/\/www.facebook.com\/sharer.php?u=https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/&#038;t=Metabolomics%20Study%20Design%20%E2%80%93%20Global%20Untargeted%20or%20Targeted%20Metabolomics%3F' aria-hidden='false' data-av_icon='\ue8f3' data-av_iconfont='entypo-fontello' title='' data-avia-related-tooltip='Share on Facebook' rel=\"noopener\"><span class='avia_hidden_link_text'>Share on Facebook<\/span><\/a><\/li><li class='av-share-link av-social-link-twitter' ><a target=\"_blank\" aria-label=\"Share on Twitter\" href='https:\/\/twitter.com\/share?text=Metabolomics%20Study%20Design%20%E2%80%93%20Global%20Untargeted%20or%20Targeted%20Metabolomics%3F&#038;url=https:\/\/www.vanderbilt.edu\/cit\/?p=583' aria-hidden='false' data-av_icon='\ue8f1' data-av_iconfont='entypo-fontello' title='' data-avia-related-tooltip='Share on Twitter' rel=\"noopener\"><span class='avia_hidden_link_text'>Share on Twitter<\/span><\/a><\/li><li class='av-share-link av-social-link-linkedin' ><a target=\"_blank\" aria-label=\"Share on LinkedIn\" href='https:\/\/linkedin.com\/shareArticle?mini=true&#038;title=Metabolomics%20Study%20Design%20%E2%80%93%20Global%20Untargeted%20or%20Targeted%20Metabolomics%3F&#038;url=https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/' aria-hidden='false' data-av_icon='\ue8fc' data-av_iconfont='entypo-fontello' title='' data-avia-related-tooltip='Share on LinkedIn' rel=\"noopener\"><span class='avia_hidden_link_text'>Share on LinkedIn<\/span><\/a><\/li><li class='av-share-link av-social-link-mail' ><a  aria-label=\"Share by Mail\" href='mailto:?subject=Metabolomics%20Study%20Design%20%E2%80%93%20Global%20Untargeted%20or%20Targeted%20Metabolomics%3F&#038;body=https:\/\/www.vanderbilt.edu\/cit\/global-untargeted-targeted-metabolomics\/' aria-hidden='false' data-av_icon='\ue805' data-av_iconfont='entypo-fontello' title='' data-avia-related-tooltip='Share by Mail'><span class='avia_hidden_link_text'>Share by Mail<\/span><\/a><\/li><\/ul><\/div><\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":959,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/pages\/583"}],"collection":[{"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/users\/959"}],"replies":[{"embeddable":true,"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/comments?post=583"}],"version-history":[{"count":31,"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/pages\/583\/revisions"}],"predecessor-version":[{"id":1585,"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/pages\/583\/revisions\/1585"}],"wp:attachment":[{"href":"https:\/\/www.vanderbilt.edu\/cit\/wp-json\/wp\/v2\/media?parent=583"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}